mdevaluate/test/test_pbc.py

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from pytest import approx
from mdevaluate import pbc
import numpy as np
def test_pbc_diff():
x = np.random.rand(10, 3)
y = np.random.rand(10, 3)
box = np.ones((3,))
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assert pbc.pbc_diff(x, x, box) == approx(0)
dxy = (pbc.pbc_diff(x, y, box) ** 2).sum(axis=1) ** 0.5
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assert (dxy <= 0.75**0.5).all()