cut data at x and y
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parent
79d0ab1628
commit
f0448fac0f
@ -1,6 +1,6 @@
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# -*- coding: utf-8 -*-
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# Form implementation generated from reading ui file 'src/resources/_ui/basewindow.ui'
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# Form implementation generated from reading ui file './nmreval/src/resources/_ui/basewindow.ui'
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#
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# Created by: PyQt5 UI code generator 5.15.10
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#
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@ -87,6 +87,8 @@ class Ui_BaseWindow(object):
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self.menuSave.setObjectName("menuSave")
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self.menuData = QtWidgets.QMenu(self.menubar)
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self.menuData.setObjectName("menuData")
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self.menuCut_to_visible_range = QtWidgets.QMenu(self.menuData)
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self.menuCut_to_visible_range.setObjectName("menuCut_to_visible_range")
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self.menuHelp = QtWidgets.QMenu(self.menubar)
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self.menuHelp.setObjectName("menuHelp")
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self.menuExtra = QtWidgets.QMenu(self.menubar)
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@ -304,8 +306,6 @@ class Ui_BaseWindow(object):
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self.actionDerivation.setObjectName("actionDerivation")
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self.actionIntegration = QtWidgets.QAction(BaseWindow)
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self.actionIntegration.setObjectName("actionIntegration")
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self.action_cut = QtWidgets.QAction(BaseWindow)
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self.action_cut.setObjectName("action_cut")
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self.actionMove_between_plots = QtWidgets.QAction(BaseWindow)
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self.actionMove_between_plots.setObjectName("actionMove_between_plots")
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self.actionBaseline = QtWidgets.QAction(BaseWindow)
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@ -368,6 +368,10 @@ class Ui_BaseWindow(object):
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self.actionExclude_region = QtWidgets.QAction(BaseWindow)
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self.actionExclude_region.setCheckable(True)
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self.actionExclude_region.setObjectName("actionExclude_region")
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self.action_cut_xaxis = QtWidgets.QAction(BaseWindow)
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self.action_cut_xaxis.setObjectName("action_cut_xaxis")
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self.action_cut_yaxis = QtWidgets.QAction(BaseWindow)
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self.action_cut_yaxis.setObjectName("action_cut_yaxis")
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self.menuSave.addAction(self.actionSave)
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self.menuSave.addAction(self.actionExportGraphic)
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self.menuSave.addAction(self.action_save_fit_parameter)
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@ -380,6 +384,9 @@ class Ui_BaseWindow(object):
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self.menuFile.addSeparator()
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self.menuFile.addAction(self.action_close)
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self.menuFile.addSeparator()
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self.menuCut_to_visible_range.addSeparator()
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self.menuCut_to_visible_range.addAction(self.action_cut_xaxis)
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self.menuCut_to_visible_range.addAction(self.action_cut_yaxis)
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self.menuData.addAction(self.action_new_set)
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self.menuData.addAction(self.action_delete_sets)
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self.menuData.addAction(self.actionMove_between_plots)
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@ -389,7 +396,7 @@ class Ui_BaseWindow(object):
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self.menuData.addAction(self.action_sort_pts)
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self.menuData.addAction(self.actionSkip_points)
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self.menuData.addSeparator()
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self.menuData.addAction(self.action_cut)
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self.menuData.addAction(self.menuCut_to_visible_range.menuAction())
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self.menuData.addSeparator()
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self.menuData.addAction(self.actionChange_datatypes)
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self.menuHelp.addAction(self.actionShow_error_log)
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@ -515,6 +522,7 @@ class Ui_BaseWindow(object):
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self.menuFile.setTitle(_translate("BaseWindow", "&File"))
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self.menuSave.setTitle(_translate("BaseWindow", "&Save..."))
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self.menuData.setTitle(_translate("BaseWindow", "&Data"))
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self.menuCut_to_visible_range.setTitle(_translate("BaseWindow", "Cut to visible range"))
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self.menuHelp.setTitle(_translate("BaseWindow", "&Help"))
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self.menuExtra.setTitle(_translate("BaseWindow", "Math"))
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self.menuNormalize.setTitle(_translate("BaseWindow", "&Normalize"))
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@ -608,7 +616,6 @@ class Ui_BaseWindow(object):
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self.actionIntegrate.setText(_translate("BaseWindow", "Integrate"))
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self.actionDerivation.setText(_translate("BaseWindow", "Differentiation..."))
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self.actionIntegration.setText(_translate("BaseWindow", "Integration..."))
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self.action_cut.setText(_translate("BaseWindow", "Cut to visible range"))
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self.actionMove_between_plots.setText(_translate("BaseWindow", "Move sets..."))
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self.actionBaseline.setText(_translate("BaseWindow", "Baseline..."))
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self.actionCalculateT1.setText(_translate("BaseWindow", "Calculate relaxation..."))
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@ -636,6 +643,10 @@ class Ui_BaseWindow(object):
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self.actionBinning.setText(_translate("BaseWindow", "Binning..."))
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self.actionTNMH.setText(_translate("BaseWindow", "TNMH..."))
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self.actionExclude_region.setText(_translate("BaseWindow", "Exclude region"))
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self.action_cut_xaxis.setText(_translate("BaseWindow", "x axis"))
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self.action_cut_xaxis.setToolTip(_translate("BaseWindow", "Remove data points outside visible x range."))
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self.action_cut_yaxis.setText(_translate("BaseWindow", "y axis"))
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self.action_cut_yaxis.setToolTip(_translate("BaseWindow", "Remove data points outside visible y range. Uses real part of points."))
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from ..data.datawidget.datawidget import DataWidget
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from ..data.integral_widget import IntegralWidget
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from ..data.point_select import PointSelectWidget
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@ -300,10 +300,12 @@ class ExperimentContainer(QtCore.QObject):
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self._relations.pop(relation_type)
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def _update_actions(self):
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self.actions.update({'sort': self._data.sort,
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'cut': self._data.cut,
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'norm': self._data.normalize,
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'center': self.center})
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self.actions.update({
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'sort': self._data.sort,
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'cut': self._data.cut,
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'norm': self._data.normalize,
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'center': self.center,
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})
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@plot_update
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def update(self, opts: dict):
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@ -311,9 +313,11 @@ class ExperimentContainer(QtCore.QObject):
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def get_properties(self) -> dict:
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props = OrderedDict()
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props['General'] = OrderedDict([('Name', self.name),
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('Value', str(self.value)),
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('Group', str(self.group))])
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props['General'] = OrderedDict([
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('Name', self.name),
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('Value', str(self.value)),
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('Group', str(self.group)),
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])
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props['Symbol'] = OrderedDict()
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props['Line'] = OrderedDict()
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@ -480,10 +484,12 @@ class ExperimentContainer(QtCore.QObject):
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else:
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prefix = f'g[{i}].s[{j}].'
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namespace = {prefix + 'x': (self.x, 'x values'),
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prefix + 'y': [self.y, 'y values'],
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prefix + 'y_err': (self.y_err, 'y error values'),
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prefix + 'value': (self.value, str(self.value))}
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namespace = {
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prefix + 'x': (self.x, 'x values'),
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prefix + 'y': [self.y, 'y values'],
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prefix + 'y_err': (self.y_err, 'y error values'),
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prefix + 'value': (self.value, str(self.value)),
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}
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if len(self._fits) == 1:
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namespace.update({
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@ -233,7 +233,8 @@ class NMRMainWindow(QtWidgets.QMainWindow, Ui_BaseWindow):
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self.action_norm_first.triggered.connect(lambda: self.management.apply('norm', ('first',)))
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self.action_norm_last.triggered.connect(lambda: self.management.apply('norm', ('last',)))
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self.action_norm_area.triggered.connect(lambda: self.management.apply('norm', ('area',)))
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self.action_cut.triggered.connect(lambda: self.management.cut())
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self.action_cut_xaxis.triggered.connect(lambda: self.management.cut(True, False))
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self.action_cut_yaxis.triggered.connect(lambda: self.management.cut(False, True))
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self.actionConcatenate_sets.triggered.connect(lambda: self.management.cat())
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@ -450,10 +450,17 @@ class UpperManagement(QtCore.QObject):
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self.undostack.push(single_undo)
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self.undostack.endMacro()
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def cut(self):
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def cut(self, x: bool = False, y: bool = False) -> None:
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if self.current_graph:
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xlim, _ = self.graphs[self.current_graph].ranges
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self.apply('cut', xlim)
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xlim, ylim = self.graphs[self.current_graph].ranges
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if x is False:
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xlim = (None, None)
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if y is False:
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ylim = (None, None)
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self.apply('cut', (*xlim, *ylim))
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@QtCore.pyqtSlot()
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def unmask(self):
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@ -540,26 +540,37 @@ class Points:
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return self
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def cut(self, low_lim: float = None, high_lim: float = None):
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def cut(self, x_low: float = None, x_high: float = None, y_low: float = None, y_high: float = None):
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"""
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Cut
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Args:
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low_lim:
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high_lim:
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x_low: Lower limit
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x_high: Upper limit for x values
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y_low: Lower limit
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y_high: Upper limit for x valuew
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Returns:
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"""
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if low_lim is None and high_lim is None:
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if x_low is None and x_high is None and y_low is None and y_high is None:
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return self
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if low_lim is None:
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low_lim = np.min(self._x)
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if x_low is None:
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x_low = np.min(self._x)-1
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if high_lim is None:
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high_lim = np.max(self._x)
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if x_high is None:
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x_high = np.max(self._x)+1
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_mask = np.ma.masked_inside(self._x, low_lim, high_lim).mask
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if y_low is None:
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y_low = np.min(self._y.real)-1
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if y_high is None:
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y_high = np.max(self._y.real)+1
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x_mask = (self._x >= x_low) & (self._x <= x_high)
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y_mask = (self._y.real >= y_low) & (self._y.real <= y_high)
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_mask = x_mask & y_mask
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self._x = self._x[_mask]
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self._y = self._y[_mask]
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@ -172,6 +172,14 @@
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<property name="title">
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<string>&Data</string>
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</property>
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<widget class="QMenu" name="menuCut_to_visible_range">
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<property name="title">
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<string>Cut to visible range</string>
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</property>
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<addaction name="separator"/>
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<addaction name="action_cut_xaxis"/>
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<addaction name="action_cut_yaxis"/>
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</widget>
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<addaction name="action_new_set"/>
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<addaction name="action_delete_sets"/>
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<addaction name="actionMove_between_plots"/>
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@ -181,7 +189,7 @@
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<addaction name="action_sort_pts"/>
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<addaction name="actionSkip_points"/>
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<addaction name="separator"/>
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<addaction name="action_cut"/>
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<addaction name="menuCut_to_visible_range"/>
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<addaction name="separator"/>
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<addaction name="actionChange_datatypes"/>
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</widget>
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@ -862,11 +870,6 @@
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<string>Integration...</string>
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</property>
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</action>
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<action name="action_cut">
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<property name="text">
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<string>Cut to visible range</string>
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</property>
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</action>
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<action name="actionMove_between_plots">
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<property name="text">
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<string>Move sets...</string>
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@ -1030,6 +1033,22 @@
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<string>Exclude region</string>
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</property>
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</action>
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<action name="action_cut_xaxis">
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<property name="text">
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<string>x axis</string>
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</property>
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<property name="toolTip">
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<string>Remove data points outside visible x range.</string>
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</property>
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</action>
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<action name="action_cut_yaxis">
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<property name="text">
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<string>y axis</string>
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</property>
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<property name="toolTip">
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<string>Remove data points outside visible y range. Uses real part of points.</string>
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</property>
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</action>
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</widget>
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<customwidgets>
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<customwidget>
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