Commit Graph

121 Commits

Author SHA1 Message Date
25cb3d38b3 Added type hints 2024-01-10 15:11:42 +01:00
9e9c865cf9 Adjusted tests 2024-01-10 12:41:18 +01:00
ba893881a3 Removed deprecated code 2024-01-10 12:41:06 +01:00
a559f72221 Selector now checks for to many dimensions. 2024-01-09 13:46:46 +01:00
0870a94b44 Selector now also works correctly on lists. 2024-01-09 13:43:04 +01:00
7dd2074ee5 Renamed matrixes to matrices 2024-01-09 13:00:12 +01:00
949ed877fb Added module for water structure parameters 2024-01-08 07:42:04 +01:00
4f17cfe876 Added type hints and removed number_of_next_neighbors 2024-01-05 16:36:34 +01:00
b39dd3c45f Changed type hint for pbc_points 2024-01-05 16:34:18 +01:00
76db85d628 Added optional argument box to pbc_points 2024-01-05 16:30:47 +01:00
b1cb9d99cf Marked old code as deprecated 2024-01-05 16:10:46 +01:00
0968ff214c Completed new functions for free energy landscape calculations 2024-01-05 16:04:14 +01:00
9d8965ace9 Added new function for adding distances from the pore center 2024-01-04 16:25:23 +01:00
ec3f6b1c67 Added new function for energy calculations 2024-01-02 15:54:43 +01:00
c9c4ffcc59 Updated version number 2024-01-02 10:17:27 +01:00
62d05423c5 Added new function for finding maxima of occupation 2023-12-29 16:59:56 +01:00
f48dff2ede Fixed imports in init files 2023-12-28 15:18:08 +01:00
218574d50c Fixed circular import 2023-12-28 14:40:11 +01:00
dffd06d3c0 Removed docs and example from repo since documentation will be done in the wiki 2023-12-28 14:16:07 +01:00
4ace860436 Adjusted examples 2023-12-28 14:10:30 +01:00
608cdb12eb Added type hints, refactored and deleted some functions 2023-12-28 14:10:16 +01:00
f2806ca3ca Changed from len(index.shape) to index.ndim 2023-12-28 13:33:47 +01:00
4a6c02627a Added tables to requirements.txt 2023-12-28 13:30:05 +01:00
b4f9b98876 Switched to numpy histogram 2023-12-28 13:29:43 +01:00
0dd6daa941 Reorganized imports 2023-12-28 12:43:06 +01:00
94d67496ba Added type hints 2023-12-28 12:42:43 +01:00
cc08f5ae50 Added type hints 2023-12-28 12:13:53 +01:00
b66e920758 Updated type hints 2023-12-28 12:00:40 +01:00
3cfdf79777 Added type hints 2023-12-28 11:52:58 +01:00
bffcd56cdc Changed gr to work with time_average and use next_neighbors 2023-12-27 12:43:05 +01:00
cc3768925a Changed time_average to work similar to shifted_correlation 2023-12-26 16:57:53 +01:00
32e3541c4b Changed type hint for version from int to str 2023-12-26 16:40:43 +01:00
e91de71787 Combined selector and multi_selector in shifted_correlation and added type hints 2023-12-26 16:38:55 +01:00
476f7167b4 Moved functions around to circumvent a circular import 2023-12-26 16:06:38 +01:00
cedfd24bb3 Updated regex test for atom_subsets 2023-12-26 16:05:42 +01:00
cc185546d6 Small changes to type hints 2023-12-26 15:24:01 +01:00
eed94cfca6 Added type hints, adjusted imports, and doc strings 2023-12-26 12:55:53 +01:00
c00fc78f23 Added type hints, moved imports and classes around 2023-12-26 11:50:16 +01:00
8bad2861fa Updated doc strings and added type hints 2023-12-26 11:33:59 +01:00
aca9ba0723 Updated doc strings and added type hints 2023-12-26 11:29:21 +01:00
2615798088 Added dnn to next_neighbors 2023-12-26 11:07:30 +01:00
97e29e6de3 Refactored next_neighbors and added type hints 2023-12-26 11:05:16 +01:00
fd60cae3b8 Added type hints for return values 2023-12-26 11:04:17 +01:00
f48e037936 Started rewriting, adding type hints 2023-12-22 14:22:25 +01:00
2d7905315d Added cleanup_h5 to utils.py 2023-12-21 16:39:30 +01:00
21dcc7641b Adjusted van_hove_self to better work with shifted_correlation 2023-12-18 17:02:22 +01:00
e91defdc7a Added range for van Hove histogram 2023-12-13 13:49:47 +01:00
43ac510e7d renamed time from time package to pytime 2023-12-09 15:52:15 +01:00
c40ea052b8 Added new function for calculating the occupation matrix 2023-12-08 17:20:06 +01:00
5267f6abac Updated version 2023-12-06 15:47:20 +01:00